PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_1BL_C5FEAF06E.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 403aa    MW: 42730 Da    PI: 9.6833
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_1BL_C5FEAF06E.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.74.6e-22263325163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+e+kre+rkq+NRe+ArrsR+RK+ae+eeL++ v++L+aeN++Lk+e+ +l+k ++kl+ e+
  Traes_1BL_C5FEAF06E.1 263 EREVKREKRKQSNRESARRSRLRKQAETEELATQVESLTAENTSLKSEIGKLTKSSEKLRIEN 325
                            799*******************************************************98776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.7E-2821112IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1705.9E-17258322No hitNo description
PfamPF001709.4E-21263325IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-21263327IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.162265328IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-11266321No hitNo description
CDDcd147021.09E-21268316No hitNo description
PROSITE patternPS000360270285IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MACRYSLEFY MADRQAFSKG MAHDEAVAAQ KTGKSGSPPK DQPAPSPYPD WSAVQAYYSS  60
GVMPPAYFAP AIAAGHPPPP YMWGPQHMMP PPFGTPYAMY PHGGAYPHPL VPMMASPLSV  120
EPAKSANSKD KSSNKKLKEI DGSAVSTGSG NSKKTSSSGD YSGEGSSDVN DLKVSGTPRK  180
RSLDGGFDAE AIAAARNKDV VASSPIIRNG AILSNQCFPA PVIKPSVTNV ANSRAIGTPV  240
SPLPGFTGPI HTGISTELSS KDEREVKREK RKQSNRESAR RSRLRKQAET EELATQVESL  300
TAENTSLKSE IGKLTKSSEK LRIENSALVV KLKGTAAPTN TEMPLDKSAA AAAASSSPRI  360
VENFLSMIDD TSKSGVNNHM EHSEPKLRQL LGSSATTDVV AAN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279285RRSRLRK
2279286RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT2254640.0KT225464.1 Triticum aestivum GBF1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003567856.10.0PREDICTED: common plant regulatory factor 1
TrEMBLW5A5U30.0W5A5U3_WHEAT; Uncharacterized protein
STRINGMLOC_6711.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.11e-30G-box binding factor 2
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]